Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTATALTLACSLLSVMSISQAQAADNIDVSFQTILQQERNWAGLQSKSLKVGDITWSYSEGGSSTKPTLLLIHGLAGSRDNWNRVAHYLTTNYHVIIPDLPGSGETIVSHDFDYSVPNLAEKLRRFVEAANLKGPIHIAGHSLGGSIALLYAGQYPFETKSLFLVDSGGIFRSANT-IYLKDLTYL---KQLLVSK---KGDFNYLLKQTMFNP-PFIPREFLQAQEKLMINQAPQTQKLVDQLIALNKVYTPDSFAVLTKTIDAPTLILWGKQDKIINVEVANELKRLLKNAQPPVILENVGHMPILEAEQLVIQQYVPFLLKVETNQSSKTTTP
4PSU Chain:A ((18-291))----------------------------------------------ASRFIEAGGFRWHVQRMGSPAAPAILLIHGTGAASHSWRGLAPLLSRHYHVVAPDLPGHGFTQTPR---MSLPGMASDLAALLRVLQ-VAPQLVVGHSAGAAILARMCLDGSIDPKILFSLNGAFLPYGGPAASFFSPLAKMLVMNPFVPSLFAWQAGHRGAVERLIGNTGSTIDPAGIKLYGKL-VSSPNHVAAAL---RMMA-NWDLEPLLKALPNLKPLLVLVAAEGDRAIPPSVAVKVREILPK-AVIERIPALGHLAHEERPALIAALIERYAEKL-----------


General information:
TITO was launched using:
RESULT:

Template: 4PSU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1462 -97807 -66.90 -371.89
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -66.90
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_4PSU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PSU-query.scw
PDB file : Tito_Scwrl_4PSU.pdb: