Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKTSVIYPGTFDPITNGHVDLVTRASRMFDEVVVAIAIGHHKNPLFSLEERVALAQSSLGHLSNVEFVGFDGLLVNFFKEQKATAVLRGLRAVSDFEYEFQLANMNRQLDPHFEAVFLTPSEQYSFISSTLIREIARLKGDVTKFVPQAVVEAFERKHQQGW
3X1K Chain:F ((4-158))-----VLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFK---


General information:
TITO was launched using:
RESULT:

Template: 3X1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 725 -114398 -157.79 -738.05
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain F : 0.91

3D Compatibility (PKB) : -157.79
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_3X1K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3X1K-query.scw
PDB file : Tito_Scwrl_3X1K.pdb: