Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKPLSSRFLFKSFGMVAVCMSLAACGDKAWWSNNDEPELESQQI-----KRLIPSRVHDRESWAKDIDDIMKD--LDI-----PKTKQNVCSIVAVVDQESNFV-ANPQVPGLGQKAVEEVSTRLNEKFEDKLGKTIGGTIAGYFEEVLRTQPSPDNNYMSQMRKVKTEKDLDLLYREIFDFMAKHYHVSALTGAAKLVGQDIGEKMNPITTLGSMQVHINYAKANKRS----SMNTAALRDDLYTEYGGLYYGIHRLMVYPADYDKAIYRFADYNSGMYSSRNAAFQKMLKELTDKDISLDGDLLLYTKDGDPRATQSESEKELITVFASNNVLVTPRQIRDDLKLEKEKKFESTQTYIALTKLYKSKTGKEPLYAIMPQVVISGPKLSR-DYNTNWYATRVNGRYETCMQRAKRIRL-----------
4PG7 Chain:A ((20-446))HMKKLNIALL--GLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILVRDKSKKRPLNISQYHLTE-DVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKKHVITANKDLLAVHLKLLEDLAEENGVALKFEASVAGGPNNISKFMGIL---NGTSNFILSKMTKEQTT------FEEALDEAKRLGFAEA-DPTDDVEGVDAARKVV-ITSYLSFNQVIKLNDVKRRGISGVTLTDINVADQLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIGDAV---------GDTMFYGKGAGSLATGSAVVSDLLNVALFFESTLPPHF---ELKTDKTREMEKSNFFVVVNHVKGS---IENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHGYEVDKVYPVEGV


General information:
TITO was launched using:
RESULT:

Template: 4PG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1848 88918 48.12 238.38
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 48.12
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.148

(partial model without unconserved sides chains):
PDB file : Tito_4PG7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PG7-query.scw
PDB file : Tito_Scwrl_4PG7.pdb: