Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVIALFSKNWSRTMSATIVNTTDDNFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSSEYAGKVKIVKVDVTSCEETAVKYNIRNIPALLLFKNGEVVAQQIGAVPRSKLVSFIDENV
5E4W Chain:A ((3-106))-----------------IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL


General information:
TITO was launched using:
RESULT:

Template: 5E4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 444 -80749 -181.87 -776.43
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -181.87
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.775

(partial model without unconserved sides chains):
PDB file : Tito_5E4W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5E4W-query.scw
PDB file : Tito_Scwrl_5E4W.pdb: