Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLKGASPMKAVTWQGKQKMEIRNVDDPKILEPTDAIIRITATAICGSDLHLYHHGEAVLEKGYVVGHEPMGIVEEVGSQVQTLKKGQRVVIPFNISCGHCHFCLNHMESQCDESNPDQLYGGLFGFGKLNGNHWGGQAEYLRVPYADSTSFVVPDNDLPDEKVLFLSDILPTAYWSVENAGVKKGDTVVILGSGPVGLFAQKFAVMAGAERVIAVDPVQHRLDKAANYNGVET-YFLEDTAQAGTELYELA---KGGADVIIDCVGMDGLEPVKEKAKNLVSLQSGTISPLQMASQAVKKFGTVQVTGVYMTP-ASSYPLQEFFMRDIAVKHGQAPIIHLMPKIYAMIAEGLFDPTQIITHSLPLSEAAQAYEIFDKKEDKNIKVVLKP
4EJ6 Chain:A ((21-362))-----QSMMKAVRLESVGNISVRNVGIP-EPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLR-------AIGIH-----RDGGFAEYVLVP--RKQAFEIPLT-LDPVHGA-FCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV-GATATVDPSAG-DVVEAIAGPVGLVPGGVDVVIECAGVA--------------------ETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFI-NPFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAG--EVKVLVIP


General information:
TITO was launched using:
RESULT:

Template: 4EJ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2030 -187325 -92.28 -555.86
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -92.28
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_4EJ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EJ6-query.scw
PDB file : Tito_Scwrl_4EJ6.pdb: