Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKIEIKNLTFGYDSQGTLLFEQANLNFDTQWKLGLIGRNGRGKTTLLNILQNKLPYQGQVIHQQEFAYFPQQTKDKERLTYYVLNDITDFEIWEIERELQLMQTDPEILWREFSTLSGGEKTKVLLALLFVDDTHFPLIDEPTNHLDISGRKQVAAYLKKK--KQGFIVVSHDRGFIDEVVDHVLAIEKSQLELYQGNFSIYEEQKKLRDEFEMAQNEKLKKEVSRLKKTAAEKAEWSRSREGDKTKKQVGFIDTESRRVNKGAVGADAARTMKRSKAIVNRMETQISEKEKLLKDIEYIDSLTMNSQASHHKRLLSVEDLQLGYENLLFEPIHFTIEPHQRVAISGPNGAGKSSIIHYLLGAFNGKVIGEKYQPKHLSISYASQNYED--NRGTLAEFAEKN----QVDYQAFLNNLRKLGMERDVFHNKIEQMSMGQRKKVELAKSLSQPAELYTWDEPLNYLDVFNQEQLEQLILNV----KPAMLLVEHDQTFLDKVSTEIISLERI
3OZX Chain:B ((132-461))-------------------------------------------------------------------------------------------------------------WNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELLKNKYVIVVDHDLIVLDYLTDLIHIIYGESS-VY-GRVSKSYAARVGINNF----L-K--GYL---PA---EN--MKI----RPDE-----------------IK-FMLK----------------------------------------LKTKMKWTKIIKKLGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITA-DEGSVTPE-KQILSYKPQRIFPNYDGTVQQYLENASKDALSTSSWFFEEVTKRLNLH-RLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFKG-


General information:
TITO was launched using:
RESULT:

Template: 3OZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1440 28820 20.01 93.57
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : 20.01
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_3OZX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OZX-query.scw
PDB file : Tito_Scwrl_3OZX.pdb: