Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MEEWQSVFEEWFPKEISKSYPIKISKQYTSSQRWEIYAKLTKKQRELVDKHRRYLISSRFMEEHYLAATDWVFSDFKINPFFRTKRSQQKLYCECGRELKVQYIVKSPKTGKIL-KLGINHFADHLHVSPTVAASIHQGMTKVDLALDELLWLKQKNI--DFPEGLWQKYCFVLYQNRRMKQPYLP--DIKLAQRLAEFRQVEMPIYIADYQALENEIKKISEHINGQ-------------SKKRQIKKELFDDFAEEL-----------VKDVEEFLINYRAFLRK---------DWQSIV----YEEVPVHPNAYFETFISVLRKTKRQRTPEVTAQMEYFAKNQRFIQPKIYLFIWKQYCRYGFTEGFFDSIPRIVRNGFLKVLRKEREAIQ----SADKKDRTVSKEKWQLVVKDI------------------QSGNVQETIDKWKGKHYRFTEAQKQALEYYQKLEESLRF--NDEARKYLKELL
2HCN Chain:A ((12-582))LVNGVVRLLSKPWDTITTKAPEPPEGVKYVLNETTNWLWAFLAREKRPRMCSREEFIRKVNSNAAQWRSAREAVEDPKFWEMVDEEREAHLRGECHTCRAIWFMWLGARFLEFEALGFLNEDHWLGRKNSGGGVE---GLGLQKLGYILREVGTRPGGRIYADDTAGWDTRITRADLENEAKVLELLDGEHRRLARAIIELTYRSGQVVTYALNTFTNLAVQLVRMMEGEGVIGPDDVEKLTKGKGPKVRTWLSENGEERLSRMAVSGDDCVVKPLDDRFATSLHFLNAMSKVRKDIQEWKPSTGWYDWQQVPFCSN----HFTELIMKDGRTLVTPCRGQDELVGRARISPNVRDTACLAKSYAQMWLLLYFHRRDLRLMANAICSAVPVNWVPTGRTTWSIHAGGEWMTTEDMLEVWNRVWIEENEWMEDKTPVEKWSDVPYSGKREDIWCGSLIGTRARATWAENIQVAINQVRSIIGDEKYVDYMSSLK


General information:
TITO was launched using:
RESULT:

Template: 2HCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2094 94195 44.98 225.35
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 44.98
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.233

(partial model without unconserved sides chains):
PDB file : Tito_2HCN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HCN-query.scw
PDB file : Tito_Scwrl_2HCN.pdb: