Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceRRMCILTLAEKTQNPEKPNFLEDTYQEVEAPAAAMLSYGGHEIHFELDKNCWPRLRHGSAVPPGYSAHIYSEGS---DKYPPTSAVIEGTHVQKLPGFNP-KGNVRFY---EKLIGLS----
1HFO Chain:A ((1-113))---PIFTLNTNIKATDVPS---DFLSSTSALVGNILSKPGSYVAVHINTDQ--QLSFGGSTNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKL-GIPKNRMYIHFVNLNGDDVGWNGTTF


General information:
TITO was launched using:
RESULT:

Template: 1HFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 434 -12860 -29.63 -126.08
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -29.63
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.277

(partial model without unconserved sides chains):
PDB file : Tito_1HFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HFO-query.scw
PDB file : Tito_Scwrl_1HFO.pdb: