Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLKTELVIFDWDGTLYNSVGQIVASLQHAAEEHKLTLTD-EAAKSIIGLGLPEVMQTLFPEVP-DLHDSILKAYGDHYIANST-NDAWFEGISELLHDLKAQGLKLAVATGKNRRGLDRVIAKTQSTHLFDVTR-AANE--TRSKPDPLMLQEILTVTGVSVEQAVMIGDSSYDLEMAQRLGMPRIGVGYGVHSV----EVLQQFQPLTIAKDVSELHNFLREYAKLSTVDVA
4EEK Chain:A ((25-249))-DAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPDFLDVLETRFNAA-MTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEAGL-------


General information:
TITO was launched using:
RESULT:

Template: 4EEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1103 -10818 -9.81 -50.31
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -9.81
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.591

(partial model without unconserved sides chains):
PDB file : Tito_4EEK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EEK-query.scw
PDB file : Tito_Scwrl_4EEK.pdb: