Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHRQVLILASSQSLFQTVSVMVMTIGGLA-GANIANTPTLSTLPIASMFLGTALMMFPASILMAHIGRRNGFLFGAFLGVLGGIIASIGIF--YSSLSLLALGTLCVGAYQSFAQFYRFAASEVANDAFRSRAISWVLAGGIVAALIGPTLARFGGPLFQ--HLEY-------------IGSFLIISIISLVAMGILSS-LHIADTVEQKSDFTAGRPWQQIVFQPTYLVALFGAITGYGIMILGMTATPIAMRHSHHELGSITTVIQLHVLGMFLPSFFTGNLIARFGVLKIMFAGLLLFACYIGFALS---GI----QFTSF----AISLILLGVGWNFLFIGSTSLLTGTYSV-----------------AEKAKAQAINDMTVFVVGLICSFSAGALLDLFGW-KAMNIALIPWLVIAAASLFWLSQKREKQFV
4U4T Chain:A ((37-450))---NLWISVPCLLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGRRWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPKQKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWIWVPFLAIFTIAAWFGMNDLAT------------QLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSK-TQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGLLFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSDERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV---------------


General information:
TITO was launched using:
RESULT:

Template: 4U4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1729 -260458 -150.64 -725.51
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -150.64
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_4U4T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U4T-query.scw
PDB file : Tito_Scwrl_4U4T.pdb: