Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHSQPLLDCWNLDQILDDLNAHGFAIVNQAYSAEYHTQVAKECSHHFDEFREAGIQNGVVSTIRSDHILWINESLPVAEQHVETL-TSFCQHLNQAFFL-GIKEVEAHFACYNPGEFYALHRDNPQQ-----KNDRIMSTVYYLHPQWQDDWGGQLRLQDKNDIWHIITPEPNRLVIFQSNLLHEVLVSK-QQRLSITAWLRSGNSIWV
3DKQ Chain:C ((15-196))-----------------LYFQGMLIEIPNVFSKQEVSHLREQLDAR--RWIDGNQ-------RKRN--QQLDKDDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEP-ENYQGGELVIQDTYG-QQSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMWLQSM-----


General information:
TITO was launched using:
RESULT:

Template: 3DKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 775 -6019 -7.77 -36.26
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain C : 0.62

3D Compatibility (PKB) : -7.77
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_3DKQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DKQ-query.scw
PDB file : Tito_Scwrl_3DKQ.pdb: