Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNHFQFQTVPNIISGLGSIQELQNVLASKTYRKLLLVTDAG-MIKNQLHLPILQILDTLKIEHVIYADVQADPPEQVVLDAANYAKQQNVDVIVGFGGGSSLDVAKVIALLAHPNQTQNLQEMYGVN-QVKTARLPLILIPTTAGTGSEVTPISIVTTGETT-KMGIVSPVLYADTAILDATFTQNLPAHITAATGIDAMVHAIEAYTSKHKKN-IYTDILAKHALKLLNHNLPKVLKNGNDLEARQNMLFGSMLAGQAFAN---SPVAAVHALAYPLGGHFHLSHGHTNALVLVEVLKFNAPYAKQYYAELMQW-LDPYSNGSTDGLCDLFIDHMQNHLDRSGLTLKLSDLGIEESSLPRLAQDAMLQTRLLQNNPRDMTETAALAIYQAIY
1OJ7 Chain:C ((22-408))LNNFNLHTPTRILFGKGAIAGLREQIPH--DARVLITYGGGSVKKTGVLDQVLDALKG--MDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDKQAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKP-VDAKIHDRFAEGILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEGS-DDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR


General information:
TITO was launched using:
RESULT:

Template: 1OJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 2051 -62512 -30.48 -164.94
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain C : 0.74

3D Compatibility (PKB) : -30.48
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_1OJ7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OJ7-query.scw
PDB file : Tito_Scwrl_1OJ7.pdb: