Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNQLRIIGGEWKRRVLPFASIEGLRPTPDRVRETLFNWLMWNIQNAHVLDICTGSGALGFEALSRG-AASVYMIEPDKTQARFLKDNIQLLK---AHNCHLINATAQQALPRLKEQFDVVFLDPPYSLNL---WQELAHLADSHIKNNGYIYVEADRNLSELHLPATWQQIKSTKAGTVHAGLYQKVSE
4DCM Chain:A ((210-340))-------------------------------GARFFMQHLPE-NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--PFRFNAVLCNPPF----DNVAWEMFHHARRCLKINGELYIVANRHLDY----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 592 -33317 -56.28 -284.76
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -56.28
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.710

(partial model without unconserved sides chains):
PDB file : Tito_4DCM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DCM-query.scw
PDB file : Tito_Scwrl_4DCM.pdb: