Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKIAIIGGGIIGMTLASYLDTS-KF-NVALFDE-GTG-QATKASAGIISPWLS--------KRRNKQWYRLAKDGAAFFPKLIKDFQLDQTIYAQSGTLLLR-PEKDLAELAVLAEKRKEEAPEIGNI-EWLSPEQTSQALPLLKP-------A-VSLRISGGGRLDGKAYLEHLGQRLAQKQMEQIQ--AKVT-LHKKSDSWLIKGP--F-GEYTADRVILTPGPALKPLLQELGYAADIRPQKGQLLAFQTSYKMSQDWPVA-M-LDGEADFIPFMDGKILLGATHENDQGWDLAPTSEAYKGLTKSTEQFLTDPDQIKNWPYEFRVGTRAYTSDFSPFFGVLPDDPSLLAASGLGSSGLTTGPYIGYLLANFLNTGHW-PT-EDYQKDISTYITKNPS
3AD8 Chain:B ((20-391))SYDVVIVGGGGHGLATAYYLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEELPEEL------------EYDFLFSQRGVLNLAHTLGDVRESIRRVEA----NKFNGVDAEWLTPEQVKEVCPIINTGDNIRYPVMGATYQPRAGIAKHDHVAWAFARKANEMG-VDIIQNCEVTGFLKD--GEKVTGVKTTRGTILAGKVALAGAGHSSVLAELAGFELPIQSHPLQALVSELFEP---VHPTVVMSNHIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIEEQMAAAVELFPI--FARAHVLRTWGGIVDTTMDASPIISKTP-IQNLYVNCGWGTGGFKGTPGAGYTLAHTIAHDEPHKLNAPFAL--ERFETG---


General information:
TITO was launched using:
RESULT:

Template: 3AD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2015 20007 9.93 58.84
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : 9.93
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_3AD8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AD8-query.scw
PDB file : Tito_Scwrl_3AD8.pdb: