TITO

Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)

Input alignment information:

Query sequence

-----------------------------------------------------------------------------------------------------------------------------------------------------DCIISRYKDGDVNNMYTANRNEEITIEEYKVFVNEACHPYPVILPDRSVLSGDFTSAYADDDESC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

4FDT Chain:A ((21-425))

MQTKIQKYAGTAMPYPNRTDGMTPFYINHLGRHGARFPTSRKALDKVEKVLVSAQQENGLTSEGMALLSMIRRLSRLFDGQWGKLSKLGETEQEGIAGRMIRNYPQLFSNSAKIEAIATYVPRSINSMDAFLSCMIRHNPALQVQRSEGKQYNHILRFFDLNKSYVNYKEKGDWLPIYKAFVHKKISPVPIMKKF-------LLNPEQYLDKEAEEFVMALFSVAAILPDTSIPLNLEDLFTLDEWHRYWQTQNLRQYMSKSSAPVGKMLPVAIAWPLLSEFIRSAQEVISGKSDYQANFRFAHAETVIPFVSLMGIEKTDVQVCRPDSVSVYWKDYEISPMAANVQWLFYRDRDQRIWVKILLNEEAAALPISTACFPYYSWEKTRIFFNQRIEMAKKTLSVFN

General information:

TITO was launched using:	RESULT:
Template: 4FDT.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output	Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 38 2711 71.33 46.73 target 2D structure prediction score : 0.72 Monomeric hydrophicity matching model chain A : 0.51 3D Compatibility (PKB) : 71.33 2D Compatibility (Sec. Struct. Predict.) : 0.72 1D Compatibility (Hydrophobicity) : 0.51 QMean score : 0.041

(partial model without unconserved sides chains):
PDB file : Tito_4FDT.pdb:

(Unconserved sides chains are recalculated) :
Sequence: align-4FDT-query.scw
PDB file : Tito_Scwrl_4FDT.pdb: