Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIHFSINKNLFLQALNITKRAISSKNAIPILSTVKIDVTNEGVTLIGSNGQISIENFISQKNEDAGLLITSLGSILLEASFFINVVSSLPDV-TLDFKEIEQNQIVLTSGKSEITLKGKDSEQYPRIQEISASTPLILETKLLKKIINETAFAASTQESRPILTGVHFVLSQHKELKTVATDSHRLSQKKLTLEKN-SDDFDVVIPSRSLREFSAVFTDDIETVEIFFANNQILFRSENISFYTRLLEGNYPDTDRLIPTDFNTTITFNVVNLRQSMERARLLSSATQNGTVKLEIKDGVVSAHVHSPEVGKVNEEIDTDQVTGEDLTISFNPTYLIDSLKALNSEKVTISFISAVRPFTLVPADTDEDFMQLITPVRTN
4TR8 Chain:B ((16-383))HMHFTIQREALLKPLQLVAGVVE---TLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVVLE------DAAEPGEITVPARKLMDICKSLPNDVLIDIRVEEQ-KLLVKAGRSRFTLSTLPANDFP----GPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYYLNGMLLEVN-GGTLRSVATDGHRLAMCSLDAQIPSQDRHQVIVPRKGILELARLLTEQDGEVGIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPRGGDKLVVGDRQQLREAFSRTAILSNEKYRG-IRLQLSNGLLKIQANNPEQEEAEEEVQV-EYNGGNLEIGFNVSYLLDVLGVIGTEQVRFILSDSNSSALVHEA-DNDDSAYVVMPMRL-


General information:
TITO was launched using:
RESULT:

Template: 4TR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1964 -37744 -19.22 -105.14
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -19.22
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_4TR8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TR8-query.scw
PDB file : Tito_Scwrl_4TR8.pdb: