Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLTKRFNKQLDKIQVSLIRQFDQ----VISEIPGVLRLTLGEPDFTTPDHVKEAAKRAIDQNQSYYTGMSGLLTLRQAASDFVKEKYQLDYAPENEILVTIGATEALSATLTAILEEGDKVLLPAPAYPGYEPIVNLVGA--EIVEIDTTENGFVLTPEMLEKAILEQGDKLKAVILNYPANPTGITYSREQLEALAAVLRKYEIFVVCDEVYSELTYTGE----AHVSLGTMLRDQAIIINGLSKSHAMTGWRLGLIFAPATFTAQLIKSHQYLVTAANTMAQHAAVEALTAGKNDAEPMKKEYIQRRDYIIEKMTALGFEIIKPDGAFYIFAKIPAGYNQDSFAFLKDFAQKKAVAFIPGAAFGRYGEGYVRLSYAASMETIKEAMKRLEEYMREA
1O4S Chain:B ((15-386))-------SRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISP-DQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKN---FQPSLEEVEGLLVG-KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGF---DRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEV---DNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRG----DDVKFCERLLEEKKVALVPGSAFLK--PGFVRLSFATSIERLTEALDRIEDFL---


General information:
TITO was launched using:
RESULT:

Template: 1O4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2010 -6097 -3.03 -16.84
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -3.03
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_1O4S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1O4S-query.scw
PDB file : Tito_Scwrl_1O4S.pdb: