Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDKRIFVEKKADFQVKSESLVRELQHNLGLSSLKSIRIVQVYDVFDLAEDLFAPAEKHIFSEQGTDHVLDEVSVQADLANYAFFAIESLPGQFDQRAASSQEALLLLGSSSDVTVNTAQLYLVNKDIDATELEAVKNYLLNPVDSRFKDITTGIAKQEFSESDKTIPKLTFFESYTAEDFARYKAEQGMAMEVDDLLFIQDYFKSIGRVPTETELKVLDTYWSDHCRHTTFETELKHIDFSASKFQKQLQSTYDKYIAMREELGRSEKPQTLMDMATIFGRYERANGRLDDMEVSDEINACSVEIEVDVDGVKEPWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDPLSGRSYVYQAMRISGAGDITAPISETRAGKLPQQVISKTAAHGYSSYGNQIGLATTYVREYFHPGFVAKRMELGAVVGAAPKGNVVREKPEAGDVIILLGGKTGRDGVGGATGSSKVQTVESVETAG--AEVQKGNAIEERKIQRLFRNGNVTRLIKKSNDFGAGGVCVAIGELADGLEIDLNKVPLKYQGLNGTEIAISESQERMAVVVRPEDVDTFVAECNKENIDAVVVATVTEKPNLVMHWNGETIVDLERRFLDINGVRVVVDAKVVDKDVKLPEERQTSAETLESDTLTVLSDLNHASQKGLQTIFDCSVGRSTVNHPLGGRYQLTPTEASVQKLPVQHGVTHTASVIAQGFNPYVAEWSPYHGAAYAVIEATARLVAAGANWSKARFSYQEYFERMDKQAERFGQPVAALLGSIEAQIQLGLPSIGGKDSMSGTFEELTVPPTLVAFGVTTADSRKVLSPEFKAVGENIYYIPGQALSAEIDFDLIKKNFAQFEASQADHKVTSASAVKYGGVVESLALATFGNYIGAEVTLPELKTALTAQLGGFVFTSPEEIAGVEKIGQTKADFTLTVNGVKLDGHKLDSAFQGTLEEVYPTEFTQAKELEEVPAVASDVVIKAKEKVEKPVVYIPVFPGTNSEYDSAKAFEKEGAEVNLVPFVTLNEEAIVKSVETMVDNIDKTNILFFAGGFSAADEPDGSAKFIVNILLNEKVRVAIDSFIARGGLIIGICNGFQALVKSGLLPYGNFEDANNTSPTLFYNDANQHVAKMVETRIANTNSPWLAGVQVGDIHAIPVSHGEGKFVVTAEEFAELRDNGQIFSQYVDFNGKPSMDSKYNPNGSVHAIEGITSKNGQIIGKMGHSERYEDGLFQNIPGNKDQHLFASAVKHFTGK
1L5J Chain:A ((1-862))MLEEYRKHVAERAAE------------GIAPKPLDANQMAALVELLKNPPAGEEEFLLDLLTNRVP------PGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQG------------------------GYNIHPLIDALDD------AKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRPALAEKLTVTVFKVTG---------------------------ETNTDDLSPAPDAWSRPDIPLHALAM----------------------LKNAREGIEPDQPGVVGPIKQIEALQQKGFP---------LAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVP-NKRGGGLCLGGKIAPIFFNTMEDAGA-LPIEVD-----------VSNLNMGDVIDVYPYKGEVRNHET-GELLATF--------------ELKTDVLIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRACGVK--------GIRPGAYCEP--------------------------KMTSVGSQDTT------GPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRM-------------------LLPDTVGTG------GDSHTRFPIGISFP--------------AGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEIEGLPDL------KVEQAFELTDASAERSAAGCTIK---LNKEPIIEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPILCAPNDPDDARPLSAVQ-------------GEKIDEVFIGSC----------MTNIGHFRAAGK--LLDAHKG--QLPTRLWVAPPTRMDAAQLTE-------------------------EGYYSVFGKSGARIEIPGCSLC--------------------MGNQARVADGATVVSTSTR-------------NFPNRLGTGANVFLASAELAAVAALIGKLPT-------------------------PEEYQTYVAQVDKTAVDTYRYLNFNQL-----------------------------SQYTEKADGVIFQ---------------------


General information:
TITO was launched using:
RESULT:

Template: 1L5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 5461 -27787 -5.09 -32.31
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -5.09
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.182

(partial model without unconserved sides chains):
PDB file : Tito_1L5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L5J-query.scw
PDB file : Tito_Scwrl_1L5J.pdb: