Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKDIRVLLYYLYTPIENAEQFAADHLAFCKSIGLKGRILVADEGINGTVSGDYETTQKYMDYVHSLPGMEELWFKIDEENEQAFKKMFVRYKKEIVHLGLEDNDFDNDINPLETTGAYLSPKEFKEALLDKDTVVLDTRNDYEYDLGHFRGAIRPDIRNFRELP------------QWVR--------------DNKE-K-FMDKRVVVYC-TGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGNPFCNRRILTSEENEDKYLRGCSHECRVHPRNRYVSKNELTQAEVIERLAAIGESLDQAATV
3G5J Chain:B ((5-132))------------------------------------------------------------------------------------------------------------------------SVIKIEKALKLDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFVL------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3G5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 305 -10867 -35.63 -109.76
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain B : 0.58

3D Compatibility (PKB) : -35.63
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.339

(partial model without unconserved sides chains):
PDB file : Tito_3G5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3G5J-query.scw
PDB file : Tito_Scwrl_3G5J.pdb: