Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTTFTIHTVESAPAEVKEILETVEKDNNGYIPNLIGLLANAPTVLEAYQIVSSIHRRNSLTPVEREVVQITAAVTNGCAFCVAGHTAFSIKQIQMNDDLIQALRNRTPIETDPKLDTLAKFTLAVINTKGRVGDEALSEFLEAGYTQQNALDVVFGVSLAILCNYANNLANTPINPELQPYA
2GMY Chain:A ((2-148))-------------------------------KTRINYAKASPEAFKAVMALENYVQSSGLEHRFIHLIKLRASIINGCAFCVDMHVKESRHDGLSEQWINLMSVWRESPVYTEQERALLGWVDAVTKIAETGAPDDAFETLRAHFSDEEIVKITVAIGAINTWNRIAVGFRSQHPVEA----


General information:
TITO was launched using:
RESULT:

Template: 2GMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 554 -71528 -129.11 -486.59
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -129.11
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.322

(partial model without unconserved sides chains):
PDB file : Tito_2GMY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GMY-query.scw
PDB file : Tito_Scwrl_2GMY.pdb: