Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREYDIIAIGGGSGGI-ATMNRAGEHGAQAAVIEEKK---------LGGTCVNVGCVPKKIMWYGAQIAETFHQFGEDYGFKTT--DLNFDFATLRRNRESYIDRARSSYDGSF-KRNGVDLIEGHAEFVDSHTVSVNG---------ELIRAKHIVIATGAHPSIPNIPGAELGGSSDDVFAWEELPESVAILGAGYIAVELAGVLHTF---GVKTDLFVRRDRPLRGFDSYIVEGLVKEMERTNLPLHTHKVPVKLEKTTDGIT-IHFEDGTSHTASQVIWATGRRPNVKGLQLEKAGVTLNERGFIQVDEYQNTVVEGIYALGDVTGEKELTPVAIKAGRTLSERLFNGKTTAKMDYSTIPTVVFSHPAIGTVGLTEEQAIKEYGQDQIKVYKSSFAS-MYSACTRNRQESRFKLITAGSEEKVVGLHGIGYGVDEMIQGFAVAIKMGATKADFDATVAIHPTSSEEFVTMR
5EBK Chain:B ((23-492))-RAYDLVVLGAGSGGLEAGWNAAVTHKKKVAVVDVQATHGPPLFAALGGTCVNVGCVPKKLMVTGAQYMDLIRESG-GFGWEMDRESLCPNWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAHTVVVRKSEDPHSDVLETLDTEYILIATGSWPTRLGVPGDEFCITSNEAFYLEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSNHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAINEGAAFVETVFGGKPRAT-DHTKVACAVFSIPPIGTCGMTEEEAAKNY--ETVAVYASSFTPLMHNISGSKHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEELCSMR


General information:
TITO was launched using:
RESULT:

Template: 5EBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2592 -2044 -0.79 -4.61
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -0.79
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_5EBK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EBK-query.scw
PDB file : Tito_Scwrl_5EBK.pdb: