Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIRIDIPHHPYDIQIEKGCMAQAGQWLRELWQPQKVVIVTDNHVASLYAEKVKLSLEDAGF--QVAVFDFLEGEERKNLTTVQKVYEFLVKQGLTRSDGIVALGGGVVGDLAGFVASTYMRGIHFVQIPTSLTAQVDSSIGGKTGVNTPFAKNMVGTFAQPDGVLIDPLVLETLGKRELIEGMGEVIKYGLIEDPELWALLTGLNGSVE-SILEHAETLIEHSCQVKRKMVVEDELDNGIRLYLNFGHTIGHAIEATAGY-GKVMHGEAVAMGMVQISKIAEEKGLMPAGITQSITEMCQKFGLPVDYEN-WEVDKLYQALTHDKKARGNTLKLVLVPE-LGSATIHPV-SLEEMKDYLVK
3ZOK Chain:D ((17-373))--VDVDLGDRSYPIYIGSGLLDQPDLLQRH-VHGKRVLVVTNSTVAPIYLDKVVGALTNENPNVSVESVILPDGEKYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVVKYGLIRDANFFEWQEKNMPALMARDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQ-WLHGEAVAAGMVMAVDMSYRLGWIDESIVNRAHNILQQAKLPTAPPETMTVEMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLH-


General information:
TITO was launched using:
RESULT:

Template: 3ZOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2040 -55327 -27.12 -158.08
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain D : 0.80

3D Compatibility (PKB) : -27.12
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_3ZOK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZOK-query.scw
PDB file : Tito_Scwrl_3ZOK.pdb: