Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANRKIVVALGGNAILSSDPSAK--AQQEALVETAKHLVKLIKNGDDLIITHGNGPQVGNLLLQHLASDSEKNPAFPLDSLVAMTEGSIGFWLKNALQNALLDEGIEKNVASVVTQVVVDKNDPAFVNLSKPIGPFYSEEEAKAEAEKSGATFKEDAGRGWRKVVASPKPVDIKEIETIRTLLNNGQVVVAAGGGGIPVVKENNGHLTGVEAVIDKDFASQRLAELVDADLFIVLTGVDYVFVNYNKPNQEKLEHVNVAQLEEYIKQDQFAPGSMLPKVEAAIAFVNGRPEGK-AVITSLENLGALIESESGTIIEKG
3KZF Chain:B ((4-316))-AGKTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAA-AGVSPEMPLHVCGAMSQGFIGYMMSQAMDNVFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTE------------ILREDAGRGWRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRENK-VISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACI--KKPDERKLEEIKLSEILALEKDGHF--GSMGPKVRAAIEFT--QATGKMSIITSLSTAVDALNGKCGTRIIK-


General information:
TITO was launched using:
RESULT:

Template: 3KZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1621 15533 9.58 53.01
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : 9.58
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_3KZF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KZF-query.scw
PDB file : Tito_Scwrl_3KZF.pdb: