Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQYSMRFWKNKYFLLIMLCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNISKSSHSNSSKISQTKNFNDSTGQIHLNQANVN-----------EFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVK---GIGPAIFEKNKSRLAL
2HNH Chain:A ((811-880))------------------------------------------------------------------------ILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLE--------


General information:
TITO was launched using:
RESULT:

Template: 2HNH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 136 11102 81.63 198.24
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 81.63
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.729

(partial model without unconserved sides chains):
PDB file : Tito_2HNH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HNH-query.scw
PDB file : Tito_Scwrl_2HNH.pdb: