Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKLDYLQALKRIPEARGAWILHGQEPLLEQNLLDTFRKSWQQQDIER--QRYDISSVSD---WKNV-FNALNSLSLFS-QQLAIEVHGNIKPDANGLKQLKSYIQHN-ETNLLLIVLPKQDSSSLKSAFFQVVEANGVVVALTANYPQDRQRILAAEAEKLEIQLDNDAWQWLMQHHEHNLLAAKNSLMRVRDTFPDQKLIQIEQLYACLQDQSRYTTYDLSDALLEGNLAQSIKIFQYLI-GSGEPESLILWTLSKEMRLLMQLFEQPHNALQLGIWKTKVSLYQQALRRLNPQQFLGWSALLLQIDAAIKGMSNENAQHLMQQAIAELCGKTLFIH 1IQP Chain:E ((44-326)) -------------GSMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYS------SKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDK---KITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLP-------------I---------------EEPKKVLLADKIGEYNFRLVEGA--NEIIQLEALLAQFTLIGK---

General information: TITO was launched using: RESULT: Template: 1IQP.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1161 10299 8.87 37.59 target 2D structure prediction score : 0.65 Monomeric hydrophicity matching model chain E : 0.62 3D Compatibility (PKB) : 8.87 2D Compatibility (Sec. Struct. Predict.) : 0.65 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.442

(partial model without unconserved sides chains): PDB file : Tito_1IQP.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1IQP-query.scw PDB file : Tito_Scwrl_1IQP.pdb: