Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVSDELIIGLVKERIAQ-PDCVNGCIFDGFPRTIPQAEALEK----EGISIDHVIEIDVPDEEIVKRLSGRRQHPASGRVYHVVYNPPKVEGKDDETGEDLVQRPDDQEETIRKRLASYHTETEQLVGFYQGRAASGENAPTYDKLDGLRTIEDVQKDLFNILDK
1DVR Chain:B ((5-192))IRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNPACKNGFILVGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQISDDNADALKKRLAAYHAQTEPIVDFYK----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1DVR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 705 -8868 -12.58 -48.46
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -12.58
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_1DVR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DVR-query.scw
PDB file : Tito_Scwrl_1DVR.pdb: