Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIIGYARTTINDVDLTTQVDQLSDFGCQEIFHETYEVEQNDSTAVHLESVIADMQQGDALVICQLHRLGKSTRQLTELTQLFKDRGLHLISLDEGID-----T---R-EMGKIYFQLMENLANMECALIKERTLVGLDEARKKGKIGGRPKIDAKTIKKIRRLYYEKKETIQFISSKCGVSVGTCYKYINLPEKEIEQLCI
3PKZ Chain:B ((1-124))-MIIGYARVSSLDQNLERQLENLKTFGAEKIFTEKQSGKS-IENRPILQKALNFVEMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIRILAMVSEQE----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 457 -48515 -106.16 -421.87
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -106.16
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_3PKZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PKZ-query.scw
PDB file : Tito_Scwrl_3PKZ.pdb: