Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTRRKPMKFMTLNTHSWLEPEPEKKLQELADKILLEDYEVIALQEINQLLESEEVEPAKLMKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKKTLES-QV-LTVSQFQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKK---SGFYFEWKNLENYFLE---TRVPLFFLGDFNNPVDSQGYYT--------------------VRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEKLRIDFIFVPEGMQ--VKKYQRIFDGIDSPIISDHYGVEIELDVNE
4JG3 Chain:A ((2-259))-----PAMRIISVNVNGIQA----AAERGLLSWLQAQNADVICLQDTRASAFDLDD---------------------------PSFQ--LDGYFLYACDA---ELPEQGGVALYSRLQPKAVISGLGFET-------ADRYGRYL--QADFDKVSIATLLLPSGQSGDESLNQKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKNWRECQQMPGFLAPERAWLDEVFGN-LGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNAKLP----RQPRFSQHAPLIVDYDWQ-


General information:
TITO was launched using:
RESULT:

Template: 4JG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1160 -21517 -18.55 -94.37
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -18.55
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.309

(partial model without unconserved sides chains):
PDB file : Tito_4JG3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JG3-query.scw
PDB file : Tito_Scwrl_4JG3.pdb: