Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------------------------------------------------------------MKTYDAIIIGSGVSGLSAAYGLKEAGKTVLVV---------EEDLWGGTCPNRGCDPKKVLLSAVEARNRVKQLSGKGFN---EIPTANWEELQKFKRTFTDPVPESRKKQLAEAEIDHLSGTARFLDDSSIEV-----NEEVFHADYLVLATGQRPTILPVEG-KEYLKTSADFLSLPVLPKEIIFIGGGYIAFELATIANAAGSKVTIVHHNQRPLKEFEASLVEEAVHQMEASGIQFAFGVETQKIISE---------GTRYRLVGK-----ETELVADMIFCATGRQPNTESLALEQANIVFDKHG-IAVNDYLQTSNPKIFACGDIVSRKTPKLTPVATFEGNYVAKRITDATSEPIKYPIIPTIVYASPKLAEVGVTKSHASSS--DQVVEMDLTSW------FTYHRVNEPVAKAELTFDQQNYLIGAAVISEQADELIDDLTLVINQKLTKKELDSYIMGYPTLASDLSYLLK----------
3H4K Chain:A ((6-593))GTSQWLRKTVDSAAVILFSKTTCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQMFVRGKFIGDSQTVLKYYSNDELAGIVNESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGK-PQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTTLHVTKKSGVSPIV


General information:
TITO was launched using:
RESULT:

Template: 3H4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2277 21857 9.60 49.90
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 9.60
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_3H4K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H4K-query.scw
PDB file : Tito_Scwrl_3H4K.pdb: