Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------M-RLFIDGDGSP---VKEDVIKLGESYGLDVVIVTSVDHYTTKEYANHVQIV-YVDRGADSADYKIVGMVKKNDFL---------ITQ-DYGLASLVLPKGVRVFH-HSGK--------EFDEANIGTLLEQRYHSGK--------LRKA-GI-RTKGPKP-----FTEKDHMSFRQALKKAID--------
5T76 Chain:A ((8-215))AEAQKALRKAESLKKCLSVMEAKVKAQTAPNKDVQREIADLGEALAT--AVIPQWQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQFIDSNPNQPLVILEMESGATAKALNEALKLFKMHSPQTSAMLFTVDNEAGKITCLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQLATSFAQLRLGD


General information:
TITO was launched using:
RESULT:

Template: 5T76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 435 29879 68.69 208.94
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 68.69
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.073

(partial model without unconserved sides chains):
PDB file : Tito_5T76.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T76-query.scw
PDB file : Tito_Scwrl_5T76.pdb: