Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVVQTKDTMSNIYLDAVRIRHQVFVVEQGVPLSREIDK--DEAHCIHFVLYSDKKEPQGTVRLLPLENGKMKLQRMAILSEYRHQGLGKILIEEAENFAKNQGYNTILLGAQSTAETFYEKLGYTAYGDPFEDAGMPHIYMKKTL
3EFA Chain:A ((4-146))-MKII-FSASPANRAAAYALRQAVFVEERGISADVEFDVKDTDQCEYAVLYLQPDL-PITTLRLEPQADHVMRFGRVCTRKAYRGHGWGRQLLTAAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTAGPYDEDGAPVVIMHKQL


General information:
TITO was launched using:
RESULT:

Template: 3EFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 566 -17064 -30.15 -121.02
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -30.15
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.364

(partial model without unconserved sides chains):
PDB file : Tito_3EFA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EFA-query.scw
PDB file : Tito_Scwrl_3EFA.pdb: