Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVQTLYVDPTLSSAAVTSHSSYYATPVSQGGGNDDEGQAHRLCERAGGPATHASAHSVALTQSSSCTCRSRASSQSNWPTPPPPLPHAAPSSSSSVSSSYSDEDVEDETNEKDPRNYAEDVTKKYPIFTEAYAEKFRRDATPFMRVVEAASAMSRTSSPTGSVSGPPQQEKQFVLYDTYLYERTLGKGTFSKVVLGIAPPSSPALATQISGDVPARVALKVFRDKEEYIEACWDEFTILNSICVDPPSVAPEEVAAAAAAGHRQGTTTSSPYISVRSVVMFTASTCGIKQQYFADQGRFLVPMGYVAHPVHPAIVFPVMGPTLLNVLNTIRQKSKEVTRASRHKRLRTEAQSGKSTCSDGAFSTMPRQFSATAVTVDMGASGDAQQPLPPLTQEQPQQQQQRRRRVYYRGLPLPLLKAVLYQVLTFLQFIHCRGVVHTDLKPENVLFESSKVLSVDVGIYYTHYLRRNSDTVAKRMPSAAETKKRSNDDCKLHSSSLEQRAHRHEQMAFTLSSPPPSSNRSVAAVTGAAAEGEGLKAGPMEAARSAGEGAASMSSTGLSIVPVDVTPSQKGDLTLAHYVRVPMPVMNSVRVVDLGAAQFLSTFRDHSLIPGYAHVPVSYNPIQTSHYRSPEVLLGF-GWNTSADIFSLGCMIPELLTGECLFMPNHTMEHLAMMQHVIGTFHDKDGIRSGTATNLRSVFACDMRTFRHYFTLQPNNRDFDLKWPVSKSMVHEQEKQQRFASAASGKTEDDGLEPLEETLPGDIDYVTRMPTLDDILAPLPDLLDLTRRMLCYHPFKRITAEEAMQHPFFRNI
1UA2 Chain:D ((13-231))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLDFLGEGQFATVYKARD-----------KNT-NQIVAIKKI------NRTALREIKLLQELSHP----------------NI--------------IGL----------------------LDAFGHKSNISLVFDFMETDLEVIIKD-----------------------------------------------------------------------------NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN----------------------------------------------------------------------------------------------------------------------------------------GVLKLADFGLAKSFGSPN-----------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGT------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1UA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 977 -122675 -125.56 -595.51
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain D : 0.60

3D Compatibility (PKB) : -125.56
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.375

(partial model without unconserved sides chains):
PDB file : Tito_1UA2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UA2-query.scw
PDB file : Tito_Scwrl_1UA2.pdb: