TITO

Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)

Input alignment information:

Query sequence

MLAHPILASEDDEEYVIRVIFCLPALLDAYFDAVETICAEPSPPPESKTRADILHLTIQQRLLILGRVPPSTFRHFDEVSGTETEDKELPKLIDQLRHVFLENKVDIGPQALLWRKRSLSLARECSDHMNRCRVRFSLGRKVRRELVAFGSAPYAFSMISFGLIVIFSCSALVIIPALQAPLASGLAVGCVACVLLVLSASLVSFNFFTAVRSLHILYSQLFHEYLIAGGSPSDILLNSLQEPCFKPRGKDGPRDSGTKRLEMGRETKTGYYTIPYGGENRIGYIEGKQLNAQVVMIAFDSNYQITWWNNAAEVMTGFLQDGCIGKPLNELVQCFNDEDVCSLIKNTRRGNLLKIKLRSLTAAPTTLSTVVAPILNCDSKPIGNVLICANSLDNLREYRIYMHNYQVSETIGALSFLSERSSLSHEDSTLVNSLSRFVKNGLANHVETLAREMESDWDWTSVEQLLGRALGQRIGLHEVIVDPLFPPTLCVNPDVAKTFGTVVGLANGRCTVTLQMLNLTGNVFSLAVTVLLGPKCRPWDQAQLEQQLEQLLRSTAGSVYLLEERVVLHFPCQVAPILDDGDEGDANPNSDQALQITQARAIINCTVNVVTAITNMVDQHNLSLILLKTMFVSLASVRERSDLEKRLSARPCDVDVIICDSEWLSSSRDLLMNNDHGAMVIPLIDAQMPVPADVQHAICMPLVRRDVQQLILEVGKAVSMKKNAISAREERERILTLRQDSPWTRGKLLGRGSYGAVYEATSDLTGGKMAVKMFYFSQN-VESSISTLLNEVSIMCSLNHPNIVHYFHCERKDNNVSLFMELCEASLTDIIVGRRQKPAHLSVVQIIRQVLTAIAYLHSRGIAHRDVKPQNILLKG-ETVKLTDFGTAIQGNAGKEVRGTFRYMAPEVYK---GDPHSLSCDIWSIGCLVCELFACPTPFMENSSLLGEMTSTVDYLT-R---VPQNPVLIDFLEKCFQLDPERRWGAGDLLMHPLLSGNAAASSLVKLETIFDAKHSNPLDPSSQSVFSLRSA

1U5R Chain:A ((54-321))

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDL-------------------------

General information:

TITO was launched using:	RESULT:
Template: 1U5R.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output	Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1353 -54078 -39.97 -208.79 target 2D structure prediction score : 0.73 Monomeric hydrophicity matching model chain A : 0.55 3D Compatibility (PKB) : -39.97 2D Compatibility (Sec. Struct. Predict.) : 0.73 1D Compatibility (Hydrophobicity) : 0.55 QMean score : 0.415

(partial model without unconserved sides chains):
PDB file : Tito_1U5R.pdb:

(Unconserved sides chains are recalculated) :
Sequence: align-1U5R-query.scw
PDB file : Tito_Scwrl_1U5R.pdb: