Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLPNPVLAKVTERVIARSQKTRSAYLQRIEHAQGKFPARGALSCANLAHGFAGMEDNEKLIIKVGREPNIGIVSSYNEMLSAHAPYKTFPDIIKTAARENGGVAQFAGGVPAMCDGITQGNASM-ELSLFSRETIAMGTAIAL--SHNMFDAALCLGVCDKIVPGLLIGALQFGYLPTIFVPAGPMSSGLSNDDKAKIRQQFATGQVGRDALLEAESAAYHGQGTCTFYGTANSNQMLMEVMGLHLPSAAFVHPHTPLRDALTAEAAKRVLDLTAEQGNYTPIGHVIDEKAIINGIVALLATGGSTNHTLHLIAIAHAAGILIDWDDFDELSAVVPLLAKIYPNGKADVNH-FQAAGGVAFLIRNLLEAGLLHNDVKTVAGKGLQHYTKEPKLI-DGKLTWV---DGVVQSLDDKVLRSIDAPFQPDGGLRLMQGRLGRGVIKISAVAPEHRKVKAPAIVFDSQEAVQAAFDRGELHRDFIAVVRFQGARANGMPELHRLTPVLG-VLQDQGFHVALVTDGRMSGASGKVPAVIHLSPEALLNGPIGKVQTGDMLIIDAEAGVLDIELDEQTWQSRPVAQPEHQAENEVGFGRELFGVFRAAAAPAEHGASVFGALVGEEPQGQI----
4R5O Chain:A ((2-427))DDCEDLHLGNLA---------------HYPNVLKGTFPTES-----------QVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPC-----RADLSCIIKN------KYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEK-----------------KTAYQDCYASLNAGKTLGIGNYDSANIIHS--------------------NGKFYLLVGTSTSN-----------------RDHFYIVDAKTLY-----------YENSAVVGANLSGLTILNEQYGLVTGDG-----IRRIDLKSLNNVRIKNERL-----LCFYNSIIY-NGKVLSNDTYKDESKVKYYDVNELIA----------AKEGEAPAVTELDIIQKQKINFVLAKDGNVYTLESA--------------------DNGCNIVKIK--------------------------------NDFTLEKVFANFQPAKGP--YHSSPTIGMVASETENIIYLVSTD------GAIYKYI-LGDSDSLKAPFIAAESG--VSITAP-----LQLNQQSGELYVTYTEERKDESKIVVY-------------SKDGKVLHTVDCGESVPSQILFNN


General information:
TITO was launched using:
RESULT:

Template: 4R5O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2193 46955 21.41 113.69
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 21.41
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.159

(partial model without unconserved sides chains):
PDB file : Tito_4R5O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R5O-query.scw
PDB file : Tito_Scwrl_4R5O.pdb: