Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLKMRLKHIILTTCLCSTLAMAELPQDSRRPGGIAVIPLTSDIT--QVTFQHKPVLISQ-EGQQRYAVFGIPLSTPLGS--VQLE--TNKAPIQIEVKSYPYAEQRLKVTNQDYVNPNQSQLDRYAQEAKEQNDVYSSFTQSSW-QALPKFIRPTSGKFTNSFGRKRFFNGEERAPHSGLDIPAPIGQKVVAPADGVVVQTGHYFFNGQTVLIDHGQGLISMFCHLSEIRVEKGQHIRQGETLGLVGKTGRVTGPHLHWGMSLNNARVDPQLFLTTTH
2HSI Chain:B ((30-279))-------------------------LLNKPVPGGVAVVDLGEEGPPPRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAATGNHEERFSVGSK-----------------LPEDLKRIERELAEQTAAYRRFS--PGLPSNLMLDKPVDGPLSSPFG-----------PHSGLDFAVPAGTPIKAPAAGKVILIGDYFFNGKTVFVDHGQGFISMFCHLSKIDVKLGQQVPRGGVLGKVGATGRATGPHMHWNVSLNDARVDPAIFIGA--


General information:
TITO was launched using:
RESULT:

Template: 2HSI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1173 -6667 -5.68 -31.15
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -5.68
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_2HSI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HSI-query.scw
PDB file : Tito_Scwrl_2HSI.pdb: