Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRCNVMKILIIDNYDSFTFNLYQLLGEILISLKSRKEISDFEIVVKRNNEISLDEIRKLEFDRIIISPGPGSPDDERYFGISKQVILQLGKEIPILGVCLGMQGIAYCFGGKVIRAKLPMHGKISTINH-SDSGVFSGIPQDVEVMRYHSLIVDSSTLPECFIVTARVNSAYSDSEEEIMGIKHQTYPIEGVQFHPESFASEAGKTLLQNFVHSKL
2VXO Chain:B ((28-223))---YEGAVVILDAGAQYGKVIDRRVRELF-----------VQSEIFPLETP-AFAIKEQGFRAIIISGGPNSVYAED-APWFDP--AIFTIGKPVLGICYGMQMMNKVFGGTVHKKS---DGVF-NISVDNTCSLFRGLQKEEVVLLTHGDSVDK--VADGFKVVARS------GNI-VAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYD--


General information:
TITO was launched using:
RESULT:

Template: 2VXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1040 -76392 -73.45 -419.73
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -73.45
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_2VXO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VXO-query.scw
PDB file : Tito_Scwrl_2VXO.pdb: