Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQHQSLFNKSQWTQLVKHFSAVAVLGLTIAAPAWAIDPTAKELRIGFQKS--SINFAIAKQQKLFEQEFPNAKITWNEFPAGPQILEALAVGSLDVGVTGDTPPVYAQAAGKPLYYIAYEAAKPLASAILVPKNSQLK-QLKDIKGKRIALQKGSSSHYLLVQAVRKAGLKWSDITPIWLTPADARAAFQKGAVDAWAIWDPYYASA----QLEDQA-----RVLVSG--KGL---SPNYTFYLAAPNFVKQYPKAVPGLIKQINQADKWVQSYQVETASAIGQST-GLKPATSDLFIKRRPRPSSAAPLNSKVIAEQQQIADIFTQQGIIPKPISIKQAVWGAK
4ESW Chain:B ((7-296))--------------------------------------NKITFLLNWEAAPYHIPVYLANIKGYFKDE--NLDIAILEPSNPSDVTELVGSGKVDMGLKAMVGTLAAKARGFPVTSIGSL-LDEPFTGICYLEGSGITSDFQSLKGKRIGYV-GEFGKIQVDELTKHYGMTPDDYVAVRCG-MNVAKYILEGTIDCGIGIECIQQVELEEALKEQGKDSNDAKMLRIDKLAELGCCCFCTILYIANDKFIAENPQAVKKFLKAIKRATDYMLAHPREAWAEYGNFKPTMQTDLNTKKFQRCYAYFSE--SLYNVHRDWRKVNNYGKRLDILPENY----------


General information:
TITO was launched using:
RESULT:

Template: 4ESW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1467 -3289 -2.24 -12.09
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -2.24
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_4ESW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ESW-query.scw
PDB file : Tito_Scwrl_4ESW.pdb: