Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTLSMNYLQDARQHVLQQIRTACELAQREPETVQLLAVSKTHPSERLR-EMYAAGQRAFGENYLQEALDKIDALQDLDIEWHFIGH-VQRNKTKHLA---EKFDWVHGVDRLIIAERLSNQRGDDQAALNICLQVNIDGQESKDGCAPE-DVAELVAQMSQLPKIKLRGLMVIPAPDNT--G----------AFADAKKLFDAVKVQHAHPEDWDTLSMGMSSDLEAAIA-AGSTMVRVGTALFGARDYSQKG
4V15 Chain:B ((31-261))---LDLPAFEANLRAMQAWAD---------RHEVALRPHAKAHKCPEIALRQLALGARGICCQKVSEALPFVAA-GI-R-DIHISNEVVGPAKLALLGQLARAAKISVCVDNAENLAQLSAAMTRAGAEIDVLVEVDVGQ--GRCGVSDDATVLALAQQARALPGLNFAGLQAYHGSVQHYRTREERAAVCRQAARIAASYAQLLRESG--I-ACDTITGGGTGSVEFDAASGVYTELQAGSYAFMDSDYG---


General information:
TITO was launched using:
RESULT:

Template: 4V15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1041 2942 2.83 13.88
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : 2.83
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_4V15.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4V15-query.scw
PDB file : Tito_Scwrl_4V15.pdb: