Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLSASLQAIDIDDSIQLEQDGSILYLWLNRPESRNAMNLNMVNAIQQVFTAIRDDLSIRAVIIRGEGGTFCAGGDIKDMAALRVEATNVGSLQPYTDFNRRFGAMLEQVEAAPQTVVVILEGAVLGGGFGLACVSDVAISRDNAQFGLPETGLGVIPAQIAPFVVKRIGLTQARRLALLGMRFEGHTALSVGVVHQIAHNEIELEQALHETIQHIKRAAPQASRVTKALLHRTLNEPLNELLDDAAQQFAQAVGGAEGQEGTMAFIQKRLPNWADES
4NNQ Chain:B ((12-257))-------------RGVRLTAEPHVLRATLTSPDGLNSLSGAALDALGAALDRAEADPECRVLLLEGSGGTFCTGLD---------------------RGGAEFLALMRRFGETPLAVVACVDGRAAGGGVGLAAAADLVIATERSEFSLPEALWGLVPCCVLPVLVRRTGFQPAYAMALSTQPVSARRAADFRLVDEVVPDP-D--AAVRRLLVRLTRLDPATIGELKQYFRAMWF-TTEDTDAFALREFTRLIDSPVARRRITDYTT----------


General information:
TITO was launched using:
RESULT:

Template: 4NNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1229 -160883 -130.91 -699.49
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -130.91
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_4NNQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NNQ-query.scw
PDB file : Tito_Scwrl_4NNQ.pdb: