Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKATQSKAWTTVQIARHPERPQ-FLDYVGEIFTE--FDALHGDRLFGDDGAMVGGLARFDGQPVMVIGQHRGRSTR------EKLKHNFGMCNPEGYRKSQRLLDMAERFNLPVFTFIDTMGAYPGVGAEERGQAEAIATSLAQLSSLKVPVIATVLGEGGSGGALGIGVA---D---RVIMLSHSIYSVISPEGCASILWKTAEK--------AA--------QASEA-LGLTADKLQSLGIVEYVVDEGEGAHLDPERVMQNLKVVLKQALDELLPMDANERCEARYQRLMKFGSENLGMAS
1PIX Chain:B ((315-582))----------------LNDKRAYDIYNVIARLFDNSELHEYKKG--YG--PEMVTGLAKVNGLLVGVVANVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYSIQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIVD-M-----------NKIRGYVEAFTEAAYQNPESICPFHQMILPRAIREFE-----


General information:
TITO was launched using:
RESULT:

Template: 1PIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1167 -5069 -4.34 -21.48
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -4.34
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_1PIX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PIX-query.scw
PDB file : Tito_Scwrl_1PIX.pdb: