Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKFQPIINQIKEKEHQQKIKDLFAKITETYPQLDTTVKWNQPMFTDHGTFIIAFSFAKNHFSIAPEKAAIRALEKNIQEAGYVYTDNVIKVPWKSVINWELIEQLISFNIEDKKGHDKFWR
2JO4 Chain:A ((2-21))---------------------------------------------------------------AKAAAAAIKAIAAIIKAGGY---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 8 -1561 -195.06 -78.03
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -195.06
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.795

(partial model without unconserved sides chains):
PDB file : Tito_2JO4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JO4-query.scw
PDB file : Tito_Scwrl_2JO4.pdb: