Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEYREIATPSRTKEILLKHGFSFKKSLGQNFLTEPNILRKIVETAQIDEHTNVIEVGPGIGALTEQLAKHAKQVVAFEIDDRLIPVLADTMQPYDNVTIVHQDILKTDLSTAVRETFHEELPLKVVANLPYYITTPIMMHFLESDLVVDELVVMMQKEVADRISAEPGTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFRLTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNAMSENMQ
1QAO Chain:A ((9-243))----------------------------SQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPK--------NQSYKIFGNIPYNISTDIIRKIVFD-SIADEIYLIVEYGFAKRLLNTKR-----SLALFLMAEVDISILSMVPREYFHPKPKVNSSLIRLNRKKSRI-SHKDKQKYNYFVMKWVNKEYKKIFTK------------NQFNNSLKHAGIDD---LNNISFEQFLSLFNSYKLFN-


General information:
TITO was launched using:
RESULT:

Template: 1QAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1129 -158550 -140.43 -674.68
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -140.43
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_1QAO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QAO-query.scw
PDB file : Tito_Scwrl_1QAO.pdb: