Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSRSYYSGSGTTAVVPHTISISTAETTPSQAPSSHTEQPSSDQQHESSLHQATASLPMSLNSTMNNKGASAAAAAAAAAPSSHGGDSHSIGAAAKASGSERANWNNPSFAAALRNSSGSINVDGYPPAQAHQQPSHPSLLSHSTDVDDEGDGAQHAAVNEPLEYCGVRLLPGVEQIDFDEGYYVGTIDENGEMAGYGKATWHSGDTYEGEWLNGMMHGKGTYTWADGDYYQGNYVRGRMEGRGEMKDATGLYTGEWADDMRQGYGRMLYAGGNVYEGEWLAGMRHGSGKLVEPAAHVTYEGEFNRNEKEGRGVQTNSDGDVYEGEFARGKPNGRGTYLWADGARYIGMFKDGVKHGDGCEWLANGDWVAGLFVDGEHVDSQSTRHKATVLTPDSSDADGGSEDGAGDGGAGGSRGSIGLSESTAAAVLAPLDAEKLRRIADQVHAPSFSMNVSAAAMRSLRSSLRKNSSSHYQDFSGPGGVTIEEASSPFLRSLAAPQMLLDDSDLEGWTPLKTIGKGSFGAVYTALLRNGRTVCCKVIELGTVESEEEMEKLRNEIALMRRL-RHPNCVQYYGSLEDKVQNTLNIFMEYVSGGTLTSFVAKFKSIPLETLRQWVYQMVCGVKYLHECGIVHRDIKGDNVLVSVDGIVKLADFGCSKAIDDVCSATHGCSTMVGTPYWMAPEVIKCE-----AGGYGVKSDIWSIGCTIVEMLT-GKPPWPECNSMWAAVYKIANS-TGLPTEIPADIDPELMDLLQRCFERNPKLRPTAADMLSHPFL------AKVTEGVASPLEKSGRK-----------------------------------------------------------------------------------------------------------
2RIO Chain:A ((8-434))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIRYYCSETTD--RFLYIALELCNLN-LQDLVESKY-----NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSGDWTVKFDKTFMDRKYHSSKLMDLLRALRNKYHHFMDLPEDIAELMGPVPDGFYDYFTKRFPNLLIGVYMIVKENLSDDQILREFLYS


General information:
TITO was launched using:
RESULT:

Template: 2RIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1393 -44801 -32.16 -162.91
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -32.16
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.396

(partial model without unconserved sides chains):
PDB file : Tito_2RIO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RIO-query.scw
PDB file : Tito_Scwrl_2RIO.pdb: