Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLCTTIQKGQIFRNILTCMSEFYIKEEFSYTVCNGKNYASPNRTILCIW-EGHIIHVRLDERCNWTRLEGDQTEELESQNVEFKVLQKCVASKYKLDPPHAWDAGHGVKLG----
1AYA Chain:A ((1-101))MRRWFHPNITGVEAENLLLTRGVDG--SFLARPSKS--NPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEK---------FATLAELVQYYMEHHGQLKEKNGDVIELKYPLN


General information:
TITO was launched using:
RESULT:

Template: 1AYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 390 -6787 -17.40 -70.70
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -17.40
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.388

(partial model without unconserved sides chains):
PDB file : Tito_1AYA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AYA-query.scw
PDB file : Tito_Scwrl_1AYA.pdb: