Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNPRSLEEEKYDMSGAR----LALILCVT--------KAREGSEEDLDALEHMFRQLRFESTMKRDPTAEQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGE-MVKLENLFEALNNKNCQALRAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAYRHDQKGSCFIQTLVDVFTKR--KGHILELLTEVTRRMAEAELV------QEGKARKTNPEIQSTLRKRLYLQ-
1CP3 Chain:A ((35-277))---------NSYKMDY--PEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSK--ED-HSKRSSFVCVLLSHGEEGIIFGTN--GPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIE----------H----KIPVDADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVAT--EFESFSFDATFHAKKQIPCIVSMLTKELYFYH


General information:
TITO was launched using:
RESULT:

Template: 1CP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1005 64976 64.65 309.41
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 64.65
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_1CP3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CP3-query.scw
PDB file : Tito_Scwrl_1CP3.pdb: