Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTYEYKSHIYLAETALNVKDLASQTAFYQQVIGLEILSQTETESILGLGGK--VLVQLIQAQESGEVREHYGLYHLAILLPTRKALADVLKHLTDLQIPLVGGA---DHGYSEAIYLEDLEGNGIELYRDKPVSTWDIREDGRIIGVTEALAAQDIYELGERVEPFILAEGTRMGHIHLSVKDSRKSSQFYQKVLGLEDKFSVP------SASWIAAGDYHHHLAVNEWRGKGLASRKQGLPGLAYYVIEVAHKKELLTIAQRAQEVDA--PIKWM-------TSSKLEITDSDGIVTRIRLAR
1F1U Chain:A ((9-271))-SVPAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQ------GPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVERLT-----Q-----R-----Y-------DLYSAGELVRLDHFNQVTPDVPRGRAYLED-LGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTG----------GNGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ-


General information:
TITO was launched using:
RESULT:

Template: 1F1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1244 -8033 -6.46 -33.06
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -6.46
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.407

(partial model without unconserved sides chains):
PDB file : Tito_1F1U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1F1U-query.scw
PDB file : Tito_Scwrl_1F1U.pdb: