Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYYLPVDFYRYLIGREDQSVNEQVMIKCIDQQLKVNRLLIDQLD-LSQVSHPKMREYLLNHIELTTV-ISSTLLNRSGTAE-HLAKKRQLWTYIQQKNPEVFQAI-RK--TMLSRLTKHSVLPDRKLSNVVYQITKSVYGFN---
5HTL Chain:A ((5-145))--KLRKRLGDLLV--EEGIVSEAQLEQALNAQKNTGRRLGDTLISLGFLSETQLLNFLAQQLSLPVIDLSRAHVDIDAVPLLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEALLNQLPDYGFEFVIAPEKQLVDGFDRYY


General information:
TITO was launched using:
RESULT:

Template: 5HTL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 511 -12939 -25.32 -98.02
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -25.32
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.278

(partial model without unconserved sides chains):
PDB file : Tito_5HTL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HTL-query.scw
PDB file : Tito_Scwrl_5HTL.pdb: