Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMLAQLQNRFDQWVEQIVQYLDRLSVRERIMVVFTTIFVVVVIVGYSLWKMHSLAEQQQKRLNDLKDLMVWMQSNAVTMKPANELELDKSGKIQRVAQQQGLTVSSQQN-GEQLQIVVTHQNYAILANFLIQLA--QMGLSIQKMEMVSSEGQIKLTATV
3TRG Chain:A ((23-86))-------------------------------------------------------------------------------------QGVFFRESVRKKAEELQLTGWVKNLSHGDVELVAC-GERDSIMILTEWLWEGPPQAAVSNVNWEE-----------


General information:
TITO was launched using:
RESULT:

Template: 3TRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 191 -7377 -38.62 -120.93
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -38.62
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_3TRG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TRG-query.scw
PDB file : Tito_Scwrl_3TRG.pdb: