Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVTTYIGLGSNLGDSRQILSEAITKLKSLGEV------KVSKLYQSPPMGPQDQPNYLNAVAQLKTELLPLELLDQLQRFEQEAGRVR-LRHWGERTLDLDLLIYGNEKIQNERLTVPHVGILQRDFVVIPLLDLDADLHINDQPLKNLELIQQPTLTVLADESWA
3HSJ Chain:A ((1-139))--TVAYIAIGSNLASP---LEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLAAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPD-----------------------


General information:
TITO was launched using:
RESULT:

Template: 3HSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 600 11338 18.90 85.89
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : 18.90
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_3HSJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HSJ-query.scw
PDB file : Tito_Scwrl_3HSJ.pdb: