Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEHWLEFMGNHPILFGTLGVLIVLFFIFEGQRNGRKISPQSLGILVKAKNALLIDLRDSKDFREGHISGSRNIPYSQIASH---------------------------------ADELKASDRPLVFIC-NLGQV---AGSALQKVAHHDSYRLDGGISNWKAQGLPLVKSKPKA
3G5J Chain:A ((5-133))-------------------------------------SVIKIEKALKLDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFVLE--------


General information:
TITO was launched using:
RESULT:

Template: 3G5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 252 -12948 -51.38 -140.73
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -51.38
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.384

(partial model without unconserved sides chains):
PDB file : Tito_3G5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3G5J-query.scw
PDB file : Tito_Scwrl_3G5J.pdb: